====================================================================== Sequences: mtDNA 12S rRNA mtDNA 16S rRNA mtDNA tRNA (Val) - slow evolving genes - ====================================================================== Taxa in input order: PHYLIP Name: Name in figure: Precise name: ---------------------------------------------------------------------- LungfishAu Lungfish (Australia) Neoceratodus forsteri LungfishSA Lungfish (South America) Lepidosiren paradoxa LungfishAf Lungfish (Africa) Protopterus sp. Frog Frog Xenopus laevis Turtle Turtle Trachemys scripta Sphenodon Sphenodontid Sphenodon punctatus Lizard Lizard Sceloporus undulatus Crocodile Crocodilian Alligator mississippiensis Bird Bird Gallus gallus Human Human Homo sapiens Seal Seal Phoca vitulina Cow Cow Bos taurus Whale Whale Balaenoptera physalus Mouse Mouse Mus musculus Rat Rat Rattus norvegicus Platypus Platypus Ornithorhynchus anatinus Opossum Opossum Didelphis virginiana ======================================================================= Biological meaning: Outgroup: Lungfish Australia (Neoceratodus ??) Lungfish South America (Lepidosiren ??) Lungfish Africa (Protopterus ??) Mammals: Eutheria (= placental mammals): Artiodactyla: Cow (Bos taurus) Cetacea: Whale (Balaenoptera physalus) Carnivora: Seal (Phoca vitulina) Primates: Human (Homo sapiens) Rodentia: Mouse (Mus musculus) Rat (Rattus norvegicus) Metatheria (= mammals with pocket): Marsupialia: Opossum (Didelphis virginiana) Prototheria (= egg laying mammals) Monotrema: Platypus (Ornithorhynchus anatinus) Birds: Bird (Gallus gallus) Crocodilians: Crocodilian (Alligator mississippiensis) Sphenodontids: Sphenodontid (Sphenodon punctatus) Turtles: Turtle (Trachemys scripta) Squamates: Lizard (Sceloporus undulatus) Amphibia: Frog (Xenopus laevis)